The format of sample files for uploading is as follows.

3Dmol mapping description

Upload sample data

Such as this.

For more patterns on input files, you can download them from our Download Sample Files button.

x
HEADER HYDROLASE 15-JUL-20 6ZSL
TITLE CRYSTAL STRUCTURE OF THE SARS-COV-2 HELICASE AT 1.94 ANGSTROM
TITLE 2 RESOLUTION
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SARS-COV-2 HELICASE NSP13;
COMPND 3 CHAIN: B, A;
COMPND 4 SYNONYM: PP1AB,ORF1AB POLYPROTEIN,SARS-COV-2 HELICASE NSP13;
COMPND 5 EC: 3.4.19.12,3.4.22.-,3.4.22.69,2.7.7.48,3.6.4.12,3.6.4.13,3.1.13.-,
COMPND 6 3.1.-.-,2.1.1.-;

Enter the protein id in the PDB database, and the 3D map can be automatically generated.
According to the format of the sample number, upload the data of the corresponding protein and generate a map.

Input document format ('pdb', 'sdf', 'xyz', 'pqr', or 'mol2').

Note that the selected format must be consistent with the format of the uploaded file before drawing.

Whether to keep or strip hydrogens from imported model.

style of cartoon rendering (“trace”, “oval”, “rectangle” (default), “parabola”, “edged”).

Enter the protein id in the PDB database, and the 3D map can be automatically generated.

MicrobioSee, a web-based community microbial metagenome visualization toolkit developed in this study can be used on all operating system platforms that support modern browsers, and MicrobioSee provides data mining and visualization services for the field of microbial integration research.
The detail of MicrobioSee at here.
Less is more.

PI:Chengjian Jiang
Guangxi Research Center for Microbial and Enzyme Engineering Technology College of Life Science and Technology, Guangxi University, Nanning 530004, China.
E-mail: jiangcj@gxu.edu.cn

2021-12-15 We developed a Windows client for MicrobioSee,and macos version is being developed.
2021-11-23 We have completed the migration of all services. After that, the update log is moved to the Instruction
2021-11-17 The tutorials were made into videos posted on YouTube and Bilibili.
2021-11-14 Debuged the Stacked Bar Charts.
2021-11-10 Sorted out the code and added the funciton of upset map
2021-11-03 Completed documentation of instructions. Fixed known bugs.
2021-9-1 Major development work completed.